Languages #

• Python
• R
• Bash
• C/C++
• SQL
• LaTeX
• Java

Workflows & Reproducibility #

• Git
• Nextflow
• Snakemake

Documentation & Reporting #

• Jupyter
• R Markdown
• Markdown
• LaTeX

Containerization & envs #

• Docker
• Apptainer
• conda

Systems #

• HPC
• SLURM
• Linux